UCSF Pharmacogenetics of Membrane Transporters
Experiment View
NM_003742
XM_005246930
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Transcript:NM_003742 [Chr.2(-): 169779449-169887833 GRCh37]
Id:ABCB11_exon26
Position:Chr.2(-): 169781101-169781373 GRCh37
Chr.2(-): 169489347-169489619 NCBI36
Sequence:
CAGTACAGCACAGGAGCAATAACTGTTTCTATTTCTCAAACTTATCATACTTTTTTTCAGAAATATGAAACTAACGTTGG
GTCCCAGGGGTCTCAACTCTCTAGAGGGGAGAAACAACGCATTGCTATTGCTCGGGCCATTGTACGAGATCCTAAAATCT
TGCTACTAGATGAAGCCACTTCTGCCTTAGACACAGAAAGTGAAAAG
GTAAGTGTTGAATTTCTAAAGTCTTAGATCATT
ACAAATAAGTCTTTTGCTGTAAAATTTGTCCTT
Color Legend: SNP  UTR  CODING
Sample Sets: Set-I
Assays: ABCB11_26_DHPLC
PMT impact: P - Public  D - Discovered  E - Exclusive  (dbSNP build 138)
Array availability: I - found on Illumina Human1M-Duo BeadChip (2011-04-21)  A - found on Affymetrix Genome-Wide SNP Array 6.0 (2011-06-21)  
FeaturePMT IDdbSNP/ PubMedArray AvailabilityGenomic PositionTranscript PositionCoding PositionNucleotide ChangeStrandAmino Acid PositionAmino Acid ChangeStatisticsSample Set
no variants

Transmembrane prediction:

Non-synonymous amino acid changes shown in red, indels (insertions and deletions) in blue, and synonymous changes in green. Exon(s) indicated by black outlines.