UCSF Pharmacogenetics of Membrane Transporters
Experiment View
NM_003042
XM_005265410
XM_005265411
[Your browser is not displaying the SVG image of experimental data in gene context.]
Transcript:NM_003042 [Chr.3(+): 11034420-11080935 GRCh37]
Id:SLC6A1_exon14
Position:Chr.3(+): 11078478-11078722 GRCh37
Chr.3(+): 11053478-11053722 NCBI36
Sequence:
CCAGTTCCTCACCATCCCAGGCTGGGATTTTCCCCAGAGAGCCTCACACCTTCCTCCCCGGTACCCACAGCGCATCCAAG
TCATGGTCCAGCCCAGCGAAGACATCGTTCGCCCAGAGAATGGTCCTGAGCAGCCCCAGGCGGGCAGCTCCACCAGCAAG
GAGGCCTACATCTAG
GGTGGGGGCCACTCACCGACCCGACACTCTCACCCCCCGACCTGGCTGAGTGCGACCACCACTTG
ATGTC
Color Legend: SNP  UTR  CODING
Sample Sets: Set-I
Assays: SLC6A1_14_DHPLC
PMT impact: P - Public  D - Discovered  E - Exclusive  (dbSNP build 142)
Array availability: I - found on Illumina Human1M-Duo BeadChip (2011-04-21)  A - found on Affymetrix Genome-Wide SNP Array 6.0 (2011-06-21)  
FeaturePMT IDdbSNP/ PubMedArray AvailabilityGenomic PositionTranscript PositionCoding PositionNucleotide ChangeStrandAmino Acid PositionAmino Acid ChangeStatisticsSample Set
no variants

Transmembrane prediction:

Non-synonymous amino acid changes shown in red, indels (insertions and deletions) in blue, and synonymous changes in green. Exon(s) indicated by black outlines.