UCSF Pharmacogenetics of Membrane Transporters
Experiment View
NM_000392
XM_005269536
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Transcript:NM_000392 [Chr.10(+): 101542463-101611662 GRCh37]
Id:ABCC2_exon4-5
Position:Chr.10(+): 101553248-101553843 GRCh37
Chr.10(+): 101543238-101543833 NCBI36
Sequence:
TCCCCTCAGTCTTCGGTTAGTGGCAGTATTCTTCAGAACATCATGTGAATTTCTCTCCAGCTCCTGGTTTTGCTGATCCA
ATACAGCAGACAATGGTGTGTACAGAAAAACTCCTGGTTCCTGTCCCTATTCTGGATTCTCTCGATACTCTGTGGCACTT
TCCAATTTCAGACTCTGATCCGGACACTCTTACAG
GTAAGGAAAAAAAGAGTGGATGACATGAGGAGGTACCATGGGGCA
ACCTCTAACTCATAGTAAATGGCATCAAGTTGAGCTCCAGGATCGAATTGTATTAGAGGGATTTGATCATAGGCTTTAAT
CACAAGCATTGATATATACGGGCCATGTAGACTTCCTTTGGACAAAAGGCTCATTTTTCCTCTTTGTTTTTTTCCTCATA
GGGTGACAATTCTAATCTAGCCTACTCCTGCCTGTTCTTCATCTCCTACGGATTCCAGATCCTGATCCTGATCTTTTCAG
CATTTTCAGAAAATAATGAGTCATCAAAT
GTGAGATTCTAAATATGCCCATCTCATATATTACTTAATTGGATGATATCT
TAATGAATATAACTTTAAGATGTCTGGGTCTCACGG
Color Legend: SNP  UTR  CODING
Sample Sets: Set-I
Assays: ABCC2_4-5_DHPLC
PMT impact: P - Public  D - Discovered  E - Exclusive  (dbSNP build 142)
Array availability: I - found on Illumina Human1M-Duo BeadChip (2011-04-21)  A - found on Affymetrix Genome-Wide SNP Array 6.0 (2011-06-21)  
FeaturePMT IDdbSNP/ PubMedArray AvailabilityGenomic PositionTranscript PositionCoding PositionNucleotide ChangeStrandAmino Acid PositionAmino Acid ChangeStatisticsSample Set
no variants

Transmembrane prediction:

Non-synonymous amino acid changes shown in red, indels (insertions and deletions) in blue, and synonymous changes in green. Exon(s) indicated by black outlines.