Common Name: ABCA8
HGNC Symbol: ABCA8
HGNC Description: ATP-binding cassette, sub-family A (ABC1), member 8
HGNC ID: 38
Chromosome: Chr.17(-): 64375025-64463128
Location: 17q24
OMIM:
OMIM Phenotype: None
Accessions: NM_007168
Nucleotide RefSeq: NM_007168
Protein RefSeq: NP_009099
Entrez: 10351
Isoforms: 1
Evidence: Substrate In Vitro Evidence:
Xenopus laevis oocytes. Tsuruoka S, et al. Biochem Biophys Res Commun. 2002; 298: 41-5.
Estradiol-(-glucuronide KM = 30.4 uM
LTC4 KM = 0.1 uM
Taurocholate KM = 10.3 uM
MS-209 Inhibited estradiol-(-glucuronide uptake
MK-571 Inhibited estradiol-(-glucuronide uptake
Ochratoxin A Inhibited estradiol-(-glucuronide uptake
Tissue Distribution Evidence:
Testis, Trachea >>> Uterus, Prostate
1. TaqMan RT-PCR. Langmann T, et al. Clinical Chemistry. 2003; 49: 230-8.
Heart >> Skeletal muscle, liver
1. Northern Blot. Tsuruoka S, et al. Biochem Biophys Res Commun. 2002; 298: 41-5.
Tissues: Heart, Skeletal muscle, Testis, Trachea, Liver, Uterus, Prostate
Type: protein coding
Sets: V
PharmGKB ID: PA24383
HPRD ID: 09790
Substrates: Estradiol-b-glucuronide, LTC4, Taurocholate, MS-209, MK571, Ochratoxin A
Trivial Names: KIAA0822, MGC163152
Transcripts: NM_007168 [Chr.17(-): 64375025-64463128]
[Your browser is not displaying the SVG image of experimental data in gene context.] Study Name: ABCA8 Resequencing
Experiments:
SNP impact: P - Public D - Discovered E - Exclusive (dbSNP build 130)
SNP array availability: I - found on Illumina Human1M-Duo BeadChip A - found on Affymetrix Genome-Wide SNP Array 6.0
Feature PMT SNP ID dbSNP/ PubMed SNP Array Availability Genomic Position Transcript Position Coding Position Nucleotide Change Strand, '+' or '-' Amino Acid Position Amino Acid Change Statistics AA Freq CA Freq AS Freq ME Freq Sample Set
4141
64463598 -470 -13828 ACAAATTTGACATACAAAATATTTT T → C TCTGAGTATAATTGAACTCCTGATT
-
4142
64463579 -451 -13809 TATTTTTTCTGAGTATAATTGAACT C → T CTGATTTAAAATTAAATCAATAACC
-
Promoter 4143
64463278 -150 -13508 GCCACAATAATCTTGGACGTAAAAG A → G GAAATTGCTCCCTATAATATGATAT
-
. Exon(s) indicated by black outlines.