Common Name: CFTR
HGNC Symbol: CFTR
HGNC Description: cystic fibrosis transmembrane conductance regulator, ATP-binding cassette (sub-family C, member 7)
HGNC ID: 1884
Chromosome: Chr.7(+): 116907253-117095955
Location: 7q31.2
OMIM: 602421
OMIM Phenotype: cystic fibrosis
Accessions: NM_000492
Nucleotide RefSeq: NM_000492
Protein RefSeq: NP_000483
Entrez: 1080
Isoforms: 1
Evidence: Substrate In Vitro Evidence:
Anions (Cl-, NO3, SCN, H2SO4, etc.)
Diphenylamine-2-carboxylic acid (DPC) - Blocks conductance
Glibenclamide - Blocks conductance
Tolbutamide - Blocks conductance
Disulfonic stilbenes - Blocks conductance
- Electrophysiology measurements with Xenopus oocytes, CHO cells and HEK293 cells. Dawson DC, et al. Physiol. Rev. 1999; 79: S47-75.
7,8-benzoflavones - Activator via direct interaction
Pyrazolo derivatives - Activator via direct interaction
- Fisher rat thyroid cells. Galietta LJ, et al. JBC. 2001 Jun 8; 276(23):19723-8.
Tissue Distribution Evidence:
Trachea > Testis, Prostate
- TaqMan RT-PCR. Langmann T, et al. Clinical Chemistry. 2003; 49: 230-8.
Tissues: Trachea > Testis, Prostate
Type: protein coding
Sets: V
PharmGKB ID: PA109
HPRD ID: 03883
Substrates: Anions, Diphenylamine-2-carboxylic acid (DPC), Glibenclamide, Tolbutamide, Disulfonic stilbenes, 7,8-benzoflavones, Pyrazolo derivatives
Trivial Names: CF, MRP7, ABC35, ABCC7, CFTR/MRP, TNR-CFTR, dJ760C5.1
Transcripts: NM_000492 [Chr.7(+): 116907253-117095955]
[Your browser is not displaying the SVG image of experimental data in gene context.] Study Name: CFTR Resequencing
Experiments:
SNP impact: P - Public D - Discovered E - Exclusive (dbSNP build 130)
SNP array availability: I - found on Illumina Human1M-Duo BeadChip A - found on Affymetrix Genome-Wide SNP Array 6.0
Feature PMT SNP ID dbSNP/ PubMed SNP Array Availability Genomic Position Transcript Position Coding Position Nucleotide Change Strand, '+' or '-' Amino Acid Position Amino Acid Change Statistics AA Freq CA Freq AS Freq ME Freq Sample Set
Promoter 4200
116907097 -156 -288 GCGAAGGAGGAGAGGAGGAAGGAGC G → C GGAGGGGTGCTGGCGGGGGTGCGTA
+
Promoter 4201
116907102 -151 -283 GGAGGAGAGGAGGAAGGAGCGGGAG G → A GGTGCTGGCGGGGGTGCGTAGTGGG
+
Promoter 4202
116907111 -142 -274 GAGGAAGGAGCGGGAGGGGTGCTGG C → A GGGGGTGCGTAGTGGGTGGAGAAAG
+
Promoter 4203
116907159 -94 -226 AAGCCGCTAGAGCAAATTTGGGGCC G → T GACCAGGCAGCACTCGGCTTTTAAC
+
Promoter 4204
116907220 -33 -165 AAGGCGGGGGAAAGAGCAAAAGGAA G → A GGGTGGTGTGCGGAGTAGGGGTGGG
+
. Exon(s) indicated by black outlines.