UCSF Pharmacogenetics of Membrane Transporters
Gene View
Common Name:None
HGNC Symbol:SLC10A7
HGNC Description:solute carrier family 10, member 7
HGNC ID:23088
Superfamily:SLC
Chromosome:Chr.4(-): 147175137-147443123 GRCh37
Location:4q31.22
OMIM:611459
OMIM Phenotype:None
Accessions:None
Nucleotide RefSeq:NM_032128
Protein RefSeq:NP_115504
Entrez:84068
Ensembl:ENSG00000120519
Isoforms:5
Evidence:None
Tissues:None
Type:protein-coding
Sets:None
PharmGKB ID:
HPRD ID:13177
Substrates:None
Trivial Names:P7, C4orf13
Transcripts:NM_001029998.3 [Chr.4(-): 147175137-147443123 GRCh37]
NM_032128.3 [Chr.4(-): 147362817-147443123 GRCh37]
XM_005263278.1 [Chr.4(-): 147175137-147443123 GRCh37]
XM_005263277.1 [Chr.4(-): 147175139-147443123 GRCh37]
XM_005263276.1 [Chr.4(-): 147175139-147443123 GRCh37]
ENST00000264986 [Chr.4(-): 147177179-147442991 GRCh37]
ENST00000335472 [Chr.4(-): 147176084-147443085 GRCh37]
ENST00000394059 [Chr.4(-): 147362818-147443047 GRCh37]
ENST00000394062 [Chr.4(-): 147178005-147443123 GRCh37]
ENST00000432059 [Chr.4(-): 147175127-147443116 GRCh37]
ENST00000502607 [Chr.4(-): 147435054-147443074 GRCh37]
ENST00000507030 [Chr.4(-): 147177643-147442869 GRCh37]
ENST00000507560 [Chr.4(-): 147247113-147443025 GRCh37]
ENST00000511315 [Chr.4(-): 147363470-147442982 GRCh37]
ENST00000511374 [Chr.4(-): 147363477-147442982 GRCh37]
ENST00000513583 [Chr.4(-): 147399031-147425055 GRCh37]
Annotation History:View Events (27)

GTEx Expression by Gene and Transcript

The heat map summarizes relative expression by tissue type at two levels of tissue detail, e.g., 'Brain' and 'Brain - Amygdala'. Choose among four calculated expression values, including mean and median RPKM values, and quantile normalized (QN) distributions of these values. (Note that differences between some distributions are subtle.) The coloring is relative to the mean of all displayed values. All values are log base 2. (See also PMT GTEx Expression Plotting.) Click on a transcript or tissue to resort the data.

Tissues:
Expression values:
No expression data exists for SLC10A7.

Variant Data

View all PMT variants for SLC10A7 on UCSC Genome Browser
Showing SNP features for transcript:   
1000 Genomes  

20141104 phase 3 variant call set of the 20130502 sequence freeze and alignments for SNPs and short indels (indels > 255 and structural variants are not included here). This variant set contains 2504 individuals from 26 populations (mouse over population column heading for population sizes).
Showing gene variants in regions defined by NCBI RefSeq exons, putative promoter, and PMT resequencing assays.
Note: Frequencies are calculated directly from reported genotypes and may vary from consensus frequencies reported by the 1000 Genomes project, which relied on additional data and the GATK tool Variant Quality Score Recalibrator.
dbSNP build 142.
Array availability: I - found on Illumina Human1M-Duo BeadChip (2011-04-21)  A - found on Affymetrix Genome-Wide SNP Array 6.0 (2011-06-21)  
Download the SNP table data as a tab-delimited file.

Transmembrane prediction: TOPO2 image is not available.