UCSF Pharmacogenetics of Membrane Transporters
Gene View
Common Name:ARALAR
HGNC Symbol:SLC25A12
HGNC Description:solute carrier family 25 (aspartate/glutamate carrier), member 12
HGNC ID:10982
Chromosome:Chr.2(-): 172639915-172750816 GRCh37
OMIM Phenotype:None
Nucleotide RefSeq:NM_003705
Protein RefSeq:NP_003696
PharmGKB ID:PA35858
HPRD ID:04719
Trivial Names:AGC1, ARALAR
Transcripts:NM_003705.4 [Chr.2(-): 172639915-172750816 GRCh37]
XM_005246924.1 [Chr.2(-): 172640880-172750733 GRCh37]
XM_005246923.1 [Chr.2(-): 172640880-172728281 GRCh37]
ENST00000263812 [Chr.2(-): 172641285-172750733 GRCh37]
ENST00000392592 [Chr.2(-): 172641285-172750733 GRCh37]
ENST00000422440 [Chr.2(-): 172640880-172750762 GRCh37]
ENST00000426896 [Chr.2(-): 172690541-172750754 GRCh37]
ENST00000464063 [Chr.2(-): 172712437-172864766 GRCh37]
ENST00000472070 [Chr.2(-): 172641342-172645452 GRCh37]
ENST00000472748 [Chr.2(-): 172700879-172864762 GRCh37]
ENST00000475360 [Chr.2(-): 172693659-172749768 GRCh37]
ENST00000484227 [Chr.2(-): 172712311-172864699 GRCh37]
ENST00000485880 [Chr.2(-): 172671619-172690845 GRCh37]
ENST00000494892 [Chr.2(-): 172665935-172666790 GRCh37]
Annotation History:View Events (23)

GTEx Expression by Gene and Transcript

The heat map summarizes relative expression by tissue type at two levels of tissue detail, e.g., 'Brain' and 'Brain - Amygdala'. Choose among four calculated expression values, including mean and median RPKM values, and quantile normalized (QN) distributions of these values. (Note that differences between some distributions are subtle.) The coloring is relative to the mean of all displayed values. All values are log base 2. (See also PMT GTEx Expression Plotting.) Click on a transcript or tissue to resort the data.

Expression values:
No expression data exists for SLC25A12.

Variant Data

View all PMT variants for SLC25A12 on UCSC Genome Browser
Showing SNP features for transcript:   
1000 Genomes  

20141104 phase 3 variant call set of the 20130502 sequence freeze and alignments for SNPs and short indels (indels > 255 and structural variants are not included here). This variant set contains 2504 individuals from 26 populations (mouse over population column heading for population sizes).
Showing gene variants in regions defined by NCBI RefSeq exons, putative promoter, and PMT resequencing assays.
Note: Frequencies are calculated directly from reported genotypes and may vary from consensus frequencies reported by the 1000 Genomes project, which relied on additional data and the GATK tool Variant Quality Score Recalibrator.
dbSNP build 142.
Array availability: I - found on Illumina Human1M-Duo BeadChip (2011-04-21)  A - found on Affymetrix Genome-Wide SNP Array 6.0 (2011-06-21)  
Download the SNP table data as a tab-delimited file.

Transmembrane prediction: TOPO2 image is not available.