UCSF Pharmacogenetics of Membrane Transporters
Gene View
Common Name:ARALAR2
HGNC Symbol:SLC25A13
HGNC Description:solute carrier family 25 (aspartate/glutamate carrier), member 13
HGNC ID:10983
Superfamily:SLC
Chromosome:Chr.7(-): 95749532-95951459 GRCh37
Location:7q21.3
OMIM:603859
OMIM Phenotype:Cirullinemia, type II, adult-onset
Accessions:AF118838
Nucleotide RefSeq:NM_014251
Protein RefSeq:NP_055066
Entrez:10165
Ensembl:ENSG00000004864
Isoforms:2
Evidence:None
Tissues:None
Type:protein-coding
Sets:0
PharmGKB ID:PA35859
HPRD ID:04837
Substrates:None
Trivial Names:CTLN2, CITRIN, ARALAR2
Transcripts:NM_014251.2 [Chr.7(-): 95749532-95951459 GRCh37]
NM_001160210.1 [Chr.7(-): 95749532-95951459 GRCh37]
ENST00000265631 [Chr.7(-): 95749532-95951405 GRCh37]
ENST00000416240 [Chr.7(-): 95749533-95951459 GRCh37]
ENST00000472162 [Chr.7(-): 95822460-95951448 GRCh37]
ENST00000484495 [Chr.7(-): 95799180-95818691 GRCh37]
ENST00000487710 [Chr.7(-): 95926210-95938996 GRCh37]
ENST00000490072 [Chr.7(-): 95775866-95814323 GRCh37]
ENST00000492869 [Chr.7(-): 95799356-95813886 GRCh37]
ENST00000494085 [Chr.7(-): 95750268-95751310 GRCh37]
ENST00000542654 [Chr.7(-): 95750212-95951323 GRCh37]

GTEx Expression by Gene and Transcript

The heat map summarizes relative expression by tissue type at two levels of tissue detail, e.g., 'Brain' and 'Brain - Amygdala'. Choose among four calculated expression values, including mean and median RPKM values, and quantile normalized (QN) distributions of these values. (Note that differences between some distributions are subtle.) The coloring is relative to the mean of all displayed values. All values are log base 2. (See also PMT GTEx Expression Plotting.) Click on a transcript or tissue to resort the data.

Tissues:
Expression values:
No expression data exists for SLC25A13.

Variant Data

View all PMT variants for SLC25A13 on UCSC Genome Browser
Showing SNP features for transcript:   
1000 Genomes  

20141104 phase 3 variant call set of the 20130502 sequence freeze and alignments for SNPs and short indels (indels > 255 and structural variants are not included here). This variant set contains 2504 individuals from 26 populations (mouse over population column heading for population sizes).
Showing gene variants in regions defined by NCBI RefSeq exons, putative promoter, and PMT resequencing assays.
Note: Frequencies are calculated directly from reported genotypes and may vary from consensus frequencies reported by the 1000 Genomes project, which relied on additional data and the GATK tool Variant Quality Score Recalibrator.
dbSNP build 142.
Array availability: I - found on Illumina Human1M-Duo BeadChip (2011-04-21)  A - found on Affymetrix Genome-Wide SNP Array 6.0 (2011-06-21)  
Download the SNP table data as a tab-delimited file.

Transmembrane prediction: TOPO2 image is not available.