UCSF Pharmacogenetics of Membrane Transporters
Gene View
Common Name:APC2
HGNC Symbol:SLC25A23
HGNC Description:solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
HGNC ID:19375
Superfamily:SLC
Chromosome:Chr.19(-): 6436092-6460232 GRCh37
Location:19p13.3
OMIM:608746
OMIM Phenotype:None
Accessions:AJ619962,AW379976,BC001656,BG706035
Nucleotide RefSeq:NM_024103
Protein RefSeq:NP_077008
Entrez:79085
Ensembl:ENSG00000125648
Isoforms:2
Evidence:None
Tissues:None
Type:protein-coding
Sets:0
PharmGKB ID:PA134932456
HPRD ID:16381
Substrates:None
Trivial Names:APC2, MCSC2, SCaMC-3
Transcripts:NM_024103.2 [Chr.19(-): 6440075-6459781 GRCh37]
XM_005259643.1 [Chr.19(-): 6443572-6460232 GRCh37]
ENST00000264088 [Chr.19(-): 6436092-6459762 GRCh37]
ENST00000301454 [Chr.19(-): 6440075-6459746 GRCh37]
ENST00000334510 [Chr.19(-): 6443573-6459746 GRCh37]
ENST00000414491 [Chr.19(-): 6441485-6454681 GRCh37]
ENST00000593600 [Chr.19(-): 6441353-6454416 GRCh37]
ENST00000595267 [Chr.19(-): 6456314-6459781 GRCh37]
ENST00000595810 [Chr.19(-): 6436090-6454020 GRCh37]
ENST00000597039 [Chr.19(-): 6441941-6452612 GRCh37]
ENST00000597307 [Chr.19(-): 6456431-6465214 GRCh37]
ENST00000598704 [Chr.19(-): 6436090-6452399 GRCh37]
ENST00000598908 [Chr.19(-): 6436092-6454681 GRCh37]
ENST00000600682 [Chr.19(-): 6441485-6454681 GRCh37]
ENST00000601322 [Chr.19(-): 6436203-6454387 GRCh37]
ENST00000601760 [Chr.19(-): 6436432-6444290 GRCh37]
Annotation History:View Events (11)

GTEx Expression by Gene and Transcript

The heat map summarizes relative expression by tissue type at two levels of tissue detail, e.g., 'Brain' and 'Brain - Amygdala'. Choose among four calculated expression values, including mean and median RPKM values, and quantile normalized (QN) distributions of these values. (Note that differences between some distributions are subtle.) The coloring is relative to the mean of all displayed values. All values are log base 2. (See also PMT GTEx Expression Plotting.) Click on a transcript or tissue to resort the data.

Tissues:
Expression values:
No expression data exists for SLC25A23.

Variant Data

View all PMT variants for SLC25A23 on UCSC Genome Browser
Showing SNP features for transcript:   
1000 Genomes  

20141104 phase 3 variant call set of the 20130502 sequence freeze and alignments for SNPs and short indels (indels > 255 and structural variants are not included here). This variant set contains 2504 individuals from 26 populations (mouse over population column heading for population sizes).
Showing gene variants in regions defined by NCBI RefSeq exons, putative promoter, and PMT resequencing assays.
Note: Frequencies are calculated directly from reported genotypes and may vary from consensus frequencies reported by the 1000 Genomes project, which relied on additional data and the GATK tool Variant Quality Score Recalibrator.
dbSNP build 142.
Array availability: I - found on Illumina Human1M-Duo BeadChip (2011-04-21)  A - found on Affymetrix Genome-Wide SNP Array 6.0 (2011-06-21)  
Download the SNP table data as a tab-delimited file.

Transmembrane prediction:

Non-synonymous amino acid changes shown in red, indels (insertions and deletions) in blue, and synonymous changes in green. Exon(s) indicated by black outlines.