UCSF Pharmacogenetics of Membrane Transporters
Gene View
Common Name:SLC25A29
HGNC Symbol:SLC25A29
HGNC Description:solute carrier family 25 (mitochondrial carnitine/acylcarnitine carrier), member 29
HGNC ID:20116
Chromosome:Chr.14(-): 100745514-100772884 GRCh37
OMIM Phenotype:None
Nucleotide RefSeq:NM_001039355
Protein RefSeq:NP_001034444
PharmGKB ID:PA134980581
HPRD ID:15360
Trivial Names:CACL, ORNT3, C14orf69
Transcripts:NM_001039355.1 [Chr.14(-): 100757453-100772860 GRCh37]
XM_005267345.1 [Chr.14(-): 100757453-100772884 GRCh37]
XM_005267346.1 [Chr.14(-): 100757453-100772781 GRCh37]
XM_005267344.1 [Chr.14(-): 100757453-100772781 GRCh37]
XM_005267343.1 [Chr.14(-): 100757453-100766318 GRCh37]
ENST00000359232 [Chr.14(-): 100757448-100772870 GRCh37]
ENST00000392908 [Chr.14(-): 100757455-100772778 GRCh37]
ENST00000539621 [Chr.14(-): 100757455-100772778 GRCh37]
ENST00000553359 [Chr.14(-): 100762030-100772870 GRCh37]
ENST00000553574 [Chr.14(-): 100762230-100764585 GRCh37]
ENST00000554060 [Chr.14(-): 100759072-100772827 GRCh37]
ENST00000554224 [Chr.14(-): 100758795-100772884 GRCh37]
ENST00000554291 [Chr.14(-): 100758945-100760536 GRCh37]
ENST00000554912 [Chr.14(-): 100757453-100762882 GRCh37]
ENST00000555051 [Chr.14(-): 100762234-100765581 GRCh37]
ENST00000555475 [Chr.14(-): 100759924-100760725 GRCh37]
ENST00000555888 [Chr.14(-): 100764982-100765866 GRCh37]
ENST00000555927 [Chr.14(-): 100758567-100762198 GRCh37]
ENST00000555949 [Chr.14(-): 100764356-100772869 GRCh37]
ENST00000556201 [Chr.14(-): 100771252-100772146 GRCh37]
ENST00000556505 [Chr.14(-): 100758023-100762071 GRCh37]
ENST00000556715 [Chr.14(-): 100758862-100772852 GRCh37]
ENST00000556844 [Chr.14(-): 100771290-100772761 GRCh37]
ENST00000556868 [Chr.14(-): 100759118-100772854 GRCh37]
ENST00000556873 [Chr.14(-): 100762032-100765413 GRCh37]
ENST00000557438 [Chr.14(-): 100764935-100772781 GRCh37]
Annotation History:View Events (37)

GTEx Expression by Gene and Transcript

The heat map summarizes relative expression by tissue type at two levels of tissue detail, e.g., 'Brain' and 'Brain - Amygdala'. Choose among four calculated expression values, including mean and median RPKM values, and quantile normalized (QN) distributions of these values. (Note that differences between some distributions are subtle.) The coloring is relative to the mean of all displayed values. All values are log base 2. (See also PMT GTEx Expression Plotting.) Click on a transcript or tissue to resort the data.

Expression values:
No expression data exists for SLC25A29.

Variant Data

View all PMT variants for SLC25A29 on UCSC Genome Browser
Showing SNP features for transcript:   
1000 Genomes  

20141104 phase 3 variant call set of the 20130502 sequence freeze and alignments for SNPs and short indels (indels > 255 and structural variants are not included here). This variant set contains 2504 individuals from 26 populations (mouse over population column heading for population sizes).
Showing gene variants in regions defined by NCBI RefSeq exons, putative promoter, and PMT resequencing assays.
Note: Frequencies are calculated directly from reported genotypes and may vary from consensus frequencies reported by the 1000 Genomes project, which relied on additional data and the GATK tool Variant Quality Score Recalibrator.
dbSNP build 142.
Array availability: I - found on Illumina Human1M-Duo BeadChip (2011-04-21)  A - found on Affymetrix Genome-Wide SNP Array 6.0 (2011-06-21)  
Download the SNP table data as a tab-delimited file.

Transmembrane prediction: TOPO2 image is not available.