UCSF Pharmacogenetics of Membrane Transporters
Gene View
Common Name:SLC26A10
HGNC Symbol:SLC26A10
HGNC Description:solute carrier family 26, member 10
HGNC ID:14470
Superfamily:SLC
Chromosome:Chr.12(+): 58013693-58019934 GRCh37
Location:12q13
OMIM:
OMIM Phenotype:None
Accessions:AL050358
Nucleotide RefSeq:NM_133489
Protein RefSeq:NP_597996
Entrez:65012
Ensembl:ENSG00000135502
Isoforms:1
Evidence:None
Tissues:Unknown
Type:protein-coding
Sets:0
PharmGKB ID:PA37887
HPRD ID:10234
Substrates:Unknown
Trivial Names:
Transcripts:NM_133489.2 [Chr.12(+): 58013693-58019934 GRCh37]
ENST00000320442 [Chr.12(+): 58013693-58019914 GRCh37]
ENST00000379218 [Chr.12(+): 58013693-58019933 GRCh37]
ENST00000440686 [Chr.12(+): 58014132-58019933 GRCh37]
ENST00000463802 [Chr.12(+): 58014830-58016554 GRCh37]
ENST00000474359 [Chr.12(+): 58013310-58019923 GRCh37]
ENST00000474791 [Chr.12(+): 58018049-58019332 GRCh37]
ENST00000483647 [Chr.12(+): 58018679-58019934 GRCh37]
ENST00000487816 [Chr.12(+): 58017469-58019934 GRCh37]
ENST00000490243 [Chr.12(+): 58018297-58019933 GRCh37]
ENST00000497297 [Chr.12(+): 58014686-58015480 GRCh37]

GTEx Expression by Gene and Transcript

The heat map summarizes relative expression by tissue type at two levels of tissue detail, e.g., 'Brain' and 'Brain - Amygdala'. Choose among four calculated expression values, including mean and median RPKM values, and quantile normalized (QN) distributions of these values. (Note that differences between some distributions are subtle.) The coloring is relative to the mean of all displayed values. All values are log base 2. (See also PMT GTEx Expression Plotting.) Click on a transcript or tissue to resort the data.

Tissues:
Expression values:
No expression data exists for SLC26A10.

Variant Data

View all PMT variants for SLC26A10 on UCSC Genome Browser
Showing SNP features for transcript: NM_133489  
1000 Genomes  

20141104 phase 3 variant call set of the 20130502 sequence freeze and alignments for SNPs and short indels (indels > 255 and structural variants are not included here). This variant set contains 2504 individuals from 26 populations (mouse over population column heading for population sizes).
Showing gene variants in regions defined by NCBI RefSeq exons, putative promoter, and PMT resequencing assays.
Note: Frequencies are calculated directly from reported genotypes and may vary from consensus frequencies reported by the 1000 Genomes project, which relied on additional data and the GATK tool Variant Quality Score Recalibrator.
dbSNP build 142.
Array availability: I - found on Illumina Human1M-Duo BeadChip (2011-04-21)  A - found on Affymetrix Genome-Wide SNP Array 6.0 (2011-06-21)  
Download the SNP table data as a tab-delimited file.

Transmembrane prediction: TOPO2 image is not available.