UCSF Pharmacogenetics of Membrane Transporters
Gene View
Common Name:ZNT9
HGNC Symbol:SLC30A9
HGNC Description:solute carrier family 30 (zinc transporter), member 9
HGNC ID:1329
Superfamily:SLC
Chromosome:Chr.4(+): 41992516-42089551 GRCh37
Location:4p13
OMIM:604604
OMIM Phenotype:None
Accessions:AA427879,AY594282,BC007732,BC022981,BG323207
Nucleotide RefSeq:NM_006345
Protein RefSeq:NP_006336
Entrez:10463
Ensembl:ENSG00000014824
Isoforms:3
Evidence:None
Tissues:None
Type:protein-coding
Sets:0
PharmGKB ID:PA25909
HPRD ID:06858
Substrates:None
Trivial Names:HUEL, ZNT9, GAC63, C4orf1
Transcripts:NM_006345.3 [Chr.4(+): 41992523-42089551 GRCh37]
XM_005248044.1 [Chr.4(+): 41992516-42089549 GRCh37]
XM_005248045.1 [Chr.4(+): 41992519-42089549 GRCh37]
ENST00000264451 [Chr.4(+): 41992489-42092474 GRCh37]
ENST00000505523 [Chr.4(+): 42072206-42088393 GRCh37]
ENST00000509683 [Chr.4(+): 42065051-42080868 GRCh37]
ENST00000510460 [Chr.4(+): 41992544-42022792 GRCh37]
ENST00000513699 [Chr.4(+): 41992519-42088386 GRCh37]
Annotation History:View Events (18)

GTEx Expression by Gene and Transcript

The heat map summarizes relative expression by tissue type at two levels of tissue detail, e.g., 'Brain' and 'Brain - Amygdala'. Choose among four calculated expression values, including mean and median RPKM values, and quantile normalized (QN) distributions of these values. (Note that differences between some distributions are subtle.) The coloring is relative to the mean of all displayed values. All values are log base 2. (See also PMT GTEx Expression Plotting.) Click on a transcript or tissue to resort the data.

Tissues:
Expression values:
No expression data exists for SLC30A9.

Variant Data

View all PMT variants for SLC30A9 on UCSC Genome Browser
Showing SNP features for transcript:   
1000 Genomes  

20141104 phase 3 variant call set of the 20130502 sequence freeze and alignments for SNPs and short indels (indels > 255 and structural variants are not included here). This variant set contains 2504 individuals from 26 populations (mouse over population column heading for population sizes).
Showing gene variants in regions defined by NCBI RefSeq exons, putative promoter, and PMT resequencing assays.
Note: Frequencies are calculated directly from reported genotypes and may vary from consensus frequencies reported by the 1000 Genomes project, which relied on additional data and the GATK tool Variant Quality Score Recalibrator.
dbSNP build 142.
Array availability: I - found on Illumina Human1M-Duo BeadChip (2011-04-21)  A - found on Affymetrix Genome-Wide SNP Array 6.0 (2011-06-21)  
Download the SNP table data as a tab-delimited file.

Transmembrane prediction: TOPO2 image is not available.