UCSF Pharmacogenetics of Membrane Transporters
Gene View
Common Name:SLC34A3
HGNC Symbol:SLC34A3
HGNC Description:solute carrier family 34 (type II sodium/phosphate contransporter), member 3
HGNC ID:20305
Superfamily:SLC
Chromosome:Chr.9(+): 140125209-140131006 GRCh37
Location:9q34
OMIM:609826
OMIM Phenotype:None
Accessions:AB055000,AK095999
Nucleotide RefSeq:NM_080877
Protein RefSeq:NP_543153
Entrez:142680
Ensembl:ENSG00000198569
Isoforms:3
Evidence:None
Tissues:None
Type:protein-coding
Sets:0
PharmGKB ID:PA134930298
HPRD ID:10236
Substrates:None
Trivial Names:HHRH, NPTIIc
Transcripts:NM_080877.2 [Chr.9(+): 140125385-140131006 GRCh37]
NM_001177317.1 [Chr.9(+): 140125209-140131006 GRCh37]
NM_001177316.1 [Chr.9(+): 140125209-140131006 GRCh37]
ENST00000361134 [Chr.9(+): 140125385-140131006 GRCh37]
ENST00000538474 [Chr.9(+): 140125209-140131006 GRCh37]
Annotation History:View Events (3)

GTEx Expression by Gene and Transcript

The heat map summarizes relative expression by tissue type at two levels of tissue detail, e.g., 'Brain' and 'Brain - Amygdala'. Choose among four calculated expression values, including mean and median RPKM values, and quantile normalized (QN) distributions of these values. (Note that differences between some distributions are subtle.) The coloring is relative to the mean of all displayed values. All values are log base 2. (See also PMT GTEx Expression Plotting.) Click on a transcript or tissue to resort the data.

Tissues:
Expression values:
No expression data exists for SLC34A3.

Variant Data

View all PMT variants for SLC34A3 on UCSC Genome Browser
Showing SNP features for transcript:   
1000 Genomes  

20141104 phase 3 variant call set of the 20130502 sequence freeze and alignments for SNPs and short indels (indels > 255 and structural variants are not included here). This variant set contains 2504 individuals from 26 populations (mouse over population column heading for population sizes).
Showing gene variants in regions defined by NCBI RefSeq exons, putative promoter, and PMT resequencing assays.
Note: Frequencies are calculated directly from reported genotypes and may vary from consensus frequencies reported by the 1000 Genomes project, which relied on additional data and the GATK tool Variant Quality Score Recalibrator.
dbSNP build 142.
Array availability: I - found on Illumina Human1M-Duo BeadChip (2011-04-21)  A - found on Affymetrix Genome-Wide SNP Array 6.0 (2011-06-21)  
Download the SNP table data as a tab-delimited file.

Transmembrane prediction:

Non-synonymous amino acid changes shown in red, indels (insertions and deletions) in blue, and synonymous changes in green. Exon(s) indicated by black outlines.