UCSF Pharmacogenetics of Membrane Transporters
Gene View
Common Name:SLC35A3
HGNC Symbol:SLC35A3
HGNC Description:solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3
HGNC ID:11023
Chromosome:Chr.1(+): 100435345-100492535 GRCh37
OMIM Phenotype:None
Nucleotide RefSeq:NM_012243
Protein RefSeq:NP_036375
Evidence:Substrate In Vitro Evidence: UDP-N-acetylglucosamine (UDP-GlcNAc) when expressed in S. cerevisiae Ishida et al 1999, J Biochem (Tokyo), Vol 126 p.68-77 Tissue Distribution Evidence: Ubiquitous, found in the Golgi apparatus by immunofluorescence microscopy Ishida et al 1999, J Biochem (Tokyo), Vol 126 p.68-77 Ishida and Kawakita 2003, Pflugers Arch
PharmGKB ID:PA35891
HPRD ID:10413
Trivial Names:
Transcripts:NM_012243.2 [Chr.1(+): 100435345-100492535 GRCh37]
NM_001271684.1 [Chr.1(+): 100435345-100492535 GRCh37]
NM_001271685.1 [Chr.1(+): 100435992-100492535 GRCh37]
XM_005270691.1 [Chr.1(+): 100440527-100489009 GRCh37]
XM_005270692.1 [Chr.1(+): 100459158-100489011 GRCh37]
XM_005270693.1 [Chr.1(+): 100459236-100489009 GRCh37]
ENST00000370153 [Chr.1(+): 100436093-100489006 GRCh37]
ENST00000370155 [Chr.1(+): 100435345-100489009 GRCh37]
ENST00000370156 [Chr.1(+): 100459158-100489011 GRCh37]
ENST00000422078 [Chr.1(+): 100458599-100480897 GRCh37]
ENST00000427993 [Chr.1(+): 100435535-100488512 GRCh37]
ENST00000465289 [Chr.1(+): 100435345-100492448 GRCh37]
ENST00000532693 [Chr.1(+): 100436009-100464883 GRCh37]
ENST00000533028 [Chr.1(+): 100435992-100492535 GRCh37]
Annotation History:View Events (50)

GTEx Expression by Gene and Transcript

The heat map summarizes relative expression by tissue type at two levels of tissue detail, e.g., 'Brain' and 'Brain - Amygdala'. Choose among four calculated expression values, including mean and median RPKM values, and quantile normalized (QN) distributions of these values. (Note that differences between some distributions are subtle.) The coloring is relative to the mean of all displayed values. All values are log base 2. (See also PMT GTEx Expression Plotting.) Click on a transcript or tissue to resort the data.

Expression values:
No expression data exists for SLC35A3.

Variant Data

View all PMT variants for SLC35A3 on UCSC Genome Browser
Showing SNP features for transcript:   
1000 Genomes  

20141104 phase 3 variant call set of the 20130502 sequence freeze and alignments for SNPs and short indels (indels > 255 and structural variants are not included here). This variant set contains 2504 individuals from 26 populations (mouse over population column heading for population sizes).
Showing gene variants in regions defined by NCBI RefSeq exons, putative promoter, and PMT resequencing assays.
Note: Frequencies are calculated directly from reported genotypes and may vary from consensus frequencies reported by the 1000 Genomes project, which relied on additional data and the GATK tool Variant Quality Score Recalibrator.
dbSNP build 142.
Array availability: I - found on Illumina Human1M-Duo BeadChip (2011-04-21)  A - found on Affymetrix Genome-Wide SNP Array 6.0 (2011-06-21)  
Download the SNP table data as a tab-delimited file.

Transmembrane prediction: TOPO2 image is not available.