UCSF Pharmacogenetics of Membrane Transporters
Gene View
Common Name:None
HGNC Symbol:SLC35B1
HGNC Description:solute carrier family 35, member B1
HGNC ID:20798
Superfamily:SLC
Chromosome:Chr.17(-): 47778296-47785313 GRCh37
Location:17q21.33
OMIM:610790
OMIM Phenotype:None
Accessions:None
Nucleotide RefSeq:NM_005827
Protein RefSeq:NP_005818
Entrez:10237
Ensembl:ENSG00000121073
Isoforms:4
Evidence:None
Tissues:None
Type:protein-coding
Sets:None
PharmGKB ID:PA134864001
HPRD ID:10237
Substrates:Unknown
Trivial Names:UGTREL1
Transcripts:NM_005827.2 [Chr.17(-): 47778296-47785313 GRCh37]
NM_001278784.1 [Chr.17(-): 47778296-47785313 GRCh37]
XM_005256929.1 [Chr.17(-): 47778305-47784842 GRCh37]
XM_005256930.1 [Chr.17(-): 47778305-47784832 GRCh37]
ENST00000240333 [Chr.17(-): 47778305-47785317 GRCh37]
ENST00000415270 [Chr.17(-): 47778320-47785313 GRCh37]
ENST00000435059 [Chr.17(-): 47781294-47785282 GRCh37]
ENST00000502268 [Chr.17(-): 47780595-47784429 GRCh37]
ENST00000502406 [Chr.17(-): 47778683-47785528 GRCh37]
ENST00000503334 [Chr.17(-): 47780254-47785525 GRCh37]
ENST00000504260 [Chr.17(-): 47778649-47785133 GRCh37]
ENST00000505765 [Chr.17(-): 47783247-47784622 GRCh37]
ENST00000507477 [Chr.17(-): 47778690-47781352 GRCh37]
ENST00000507773 [Chr.17(-): 47778701-47785452 GRCh37]
ENST00000508520 [Chr.17(-): 47780559-47785531 GRCh37]
ENST00000508607 [Chr.17(-): 47783438-47785282 GRCh37]
ENST00000508749 [Chr.17(-): 47778690-47780500 GRCh37]
ENST00000508926 [Chr.17(-): 47782434-47783717 GRCh37]
ENST00000509781 [Chr.17(-): 47783230-47785326 GRCh37]
ENST00000511657 [Chr.17(-): 47782584-47786376 GRCh37]
ENST00000511763 [Chr.17(-): 47781514-47785302 GRCh37]
ENST00000513508 [Chr.17(-): 47781200-47782727 GRCh37]
ENST00000514907 [Chr.17(-): 47781462-47785519 GRCh37]
ENST00000515850 [Chr.17(-): 47781473-47785311 GRCh37]
Annotation History:View Events (33)

GTEx Expression by Gene and Transcript

The heat map summarizes relative expression by tissue type at two levels of tissue detail, e.g., 'Brain' and 'Brain - Amygdala'. Choose among four calculated expression values, including mean and median RPKM values, and quantile normalized (QN) distributions of these values. (Note that differences between some distributions are subtle.) The coloring is relative to the mean of all displayed values. All values are log base 2. (See also PMT GTEx Expression Plotting.) Click on a transcript or tissue to resort the data.

Tissues:
Expression values:
No expression data exists for SLC35B1.

Variant Data

View all PMT variants for SLC35B1 on UCSC Genome Browser
Showing SNP features for transcript:   
1000 Genomes  

20141104 phase 3 variant call set of the 20130502 sequence freeze and alignments for SNPs and short indels (indels > 255 and structural variants are not included here). This variant set contains 2504 individuals from 26 populations (mouse over population column heading for population sizes).
Showing gene variants in regions defined by NCBI RefSeq exons, putative promoter, and PMT resequencing assays.
Note: Frequencies are calculated directly from reported genotypes and may vary from consensus frequencies reported by the 1000 Genomes project, which relied on additional data and the GATK tool Variant Quality Score Recalibrator.
dbSNP build 142.
Array availability: I - found on Illumina Human1M-Duo BeadChip (2011-04-21)  A - found on Affymetrix Genome-Wide SNP Array 6.0 (2011-06-21)  
Download the SNP table data as a tab-delimited file.

Transmembrane prediction: TOPO2 image is not available.