UCSF Pharmacogenetics of Membrane Transporters
Gene View
Common Name:None
HGNC Symbol:SLC35F5
HGNC Description:solute carrier family 35, member F5
HGNC ID:23617
Chromosome:Chr.2(-): 114471354-114514400 GRCh37
OMIM Phenotype:None
Nucleotide RefSeq:NM_025181
Protein RefSeq:NP_079457
PharmGKB ID:
HPRD ID:11579
Trivial Names:
Transcripts:NM_025181.2 [Chr.2(-): 114471933-114514400 GRCh37]
XM_005263799.1 [Chr.2(-): 114471354-114514270 GRCh37]
XM_005263801.1 [Chr.2(-): 114471354-114514197 GRCh37]
XM_005263800.1 [Chr.2(-): 114471354-114514197 GRCh37]
ENST00000245680 [Chr.2(-): 114470369-114514400 GRCh37]
ENST00000409106 [Chr.2(-): 114471930-114514270 GRCh37]
ENST00000409342 [Chr.2(-): 114499461-114514197 GRCh37]
ENST00000420066 [Chr.2(-): 114472224-114476821 GRCh37]
ENST00000447673 [Chr.2(-): 114476789-114493433 GRCh37]
ENST00000459683 [Chr.2(-): 114475030-114483054 GRCh37]
ENST00000460863 [Chr.2(-): 114500177-114501475 GRCh37]
ENST00000469314 [Chr.2(-): 114475358-114477288 GRCh37]
ENST00000469702 [Chr.2(-): 114462588-114480771 GRCh37]
ENST00000470204 [Chr.2(-): 114475330-114487024 GRCh37]
ENST00000485214 [Chr.2(-): 114480680-114483439 GRCh37]
ENST00000498768 [Chr.2(-): 114499486-114514164 GRCh37]
Annotation History:View Events (26)

GTEx Expression by Gene and Transcript

The heat map summarizes relative expression by tissue type at two levels of tissue detail, e.g., 'Brain' and 'Brain - Amygdala'. Choose among four calculated expression values, including mean and median RPKM values, and quantile normalized (QN) distributions of these values. (Note that differences between some distributions are subtle.) The coloring is relative to the mean of all displayed values. All values are log base 2. (See also PMT GTEx Expression Plotting.) Click on a transcript or tissue to resort the data.

Expression values:
No expression data exists for SLC35F5.

Variant Data

View all PMT variants for SLC35F5 on UCSC Genome Browser
Showing SNP features for transcript:   
1000 Genomes  

20141104 phase 3 variant call set of the 20130502 sequence freeze and alignments for SNPs and short indels (indels > 255 and structural variants are not included here). This variant set contains 2504 individuals from 26 populations (mouse over population column heading for population sizes).
Showing gene variants in regions defined by NCBI RefSeq exons, putative promoter, and PMT resequencing assays.
Note: Frequencies are calculated directly from reported genotypes and may vary from consensus frequencies reported by the 1000 Genomes project, which relied on additional data and the GATK tool Variant Quality Score Recalibrator.
dbSNP build 142.
Array availability: I - found on Illumina Human1M-Duo BeadChip (2011-04-21)  A - found on Affymetrix Genome-Wide SNP Array 6.0 (2011-06-21)  
Download the SNP table data as a tab-delimited file.

Transmembrane prediction: TOPO2 image is not available.