UCSF Pharmacogenetics of Membrane Transporters
Gene View
Common Name:None
HGNC Symbol:SLC43A3
HGNC Description:solute carrier family 43, member 3
HGNC ID:17466
Superfamily:SLC
Chromosome:Chr.11(-): 57174427-57195053 GRCh37
Location:11q11
OMIM:
OMIM Phenotype:None
Accessions:None
Nucleotide RefSeq:NM_017611
Protein RefSeq:NP_060081
Entrez:29015
Ensembl:ENSG00000134802
Isoforms:19
Evidence:None
Tissues:None
Type:protein-coding
Sets:None
PharmGKB ID:
HPRD ID:15391
Substrates:None
Trivial Names:EEG1, FOAP-13, PRO1659, SEEEG-1
Transcripts:NM_014096.3 [Chr.11(-): 57174427-57194560 GRCh37]
NM_017611.2 [Chr.11(-): 57174427-57195053 GRCh37]
NM_199329.2 [Chr.11(-): 57174427-57194621 GRCh37]
XM_005273951.1 [Chr.11(-): 57174427-57194969 GRCh37]
XM_005273949.1 [Chr.11(-): 57174427-57194899 GRCh37]
XM_005273946.1 [Chr.11(-): 57174427-57194632 GRCh37]
XM_005273952.1 [Chr.11(-): 57174427-57194630 GRCh37]
XM_005273950.1 [Chr.11(-): 57174427-57194630 GRCh37]
XM_005273942.1 [Chr.11(-): 57174427-57194630 GRCh37]
XM_005273945.1 [Chr.11(-): 57174427-57194630 GRCh37]
XM_005273947.1 [Chr.11(-): 57174427-57194630 GRCh37]
NM_001278201.1 [Chr.11(-): 57174427-57194621 GRCh37]
NM_001278206.1 [Chr.11(-): 57174427-57194621 GRCh37]
XM_005273944.1 [Chr.11(-): 57174427-57194594 GRCh37]
XM_005273953.1 [Chr.11(-): 57174427-57194558 GRCh37]
XM_005273948.1 [Chr.11(-): 57174427-57194522 GRCh37]
XM_005273943.1 [Chr.11(-): 57174427-57194515 GRCh37]
XM_005273954.1 [Chr.11(-): 57182594-57194594 GRCh37]
XM_005273955.1 [Chr.11(-): 57182595-57194110 GRCh37]
ENST00000352187 [Chr.11(-): 57174429-57195053 GRCh37]
ENST00000395123 [Chr.11(-): 57174427-57194418 GRCh37]
ENST00000395124 [Chr.11(-): 57174429-57194594 GRCh37]
ENST00000524863 [Chr.11(-): 57193023-57194588 GRCh37]
ENST00000525205 [Chr.11(-): 57175004-57184126 GRCh37]
ENST00000525474 [Chr.11(-): 57188469-57194893 GRCh37]
ENST00000526125 [Chr.11(-): 57188829-57194594 GRCh37]
ENST00000526621 [Chr.11(-): 57193176-57194969 GRCh37]
ENST00000528098 [Chr.11(-): 57182687-57193952 GRCh37]
ENST00000528187 [Chr.11(-): 57191455-57194573 GRCh37]
ENST00000529112 [Chr.11(-): 57188532-57194125 GRCh37]
ENST00000529113 [Chr.11(-): 57185353-57193329 GRCh37]
ENST00000529494 [Chr.11(-): 57191458-57194592 GRCh37]
ENST00000529554 [Chr.11(-): 57174879-57194225 GRCh37]
ENST00000529748 [Chr.11(-): 57193580-57194817 GRCh37]
ENST00000529896 [Chr.11(-): 57193121-57194128 GRCh37]
ENST00000530005 [Chr.11(-): 57182154-57194516 GRCh37]
ENST00000530232 [Chr.11(-): 57191156-57193632 GRCh37]
ENST00000530316 [Chr.11(-): 57193513-57194594 GRCh37]
ENST00000532278 [Chr.11(-): 57193641-57194516 GRCh37]
ENST00000532795 [Chr.11(-): 57193035-57194929 GRCh37]
ENST00000533051 [Chr.11(-): 57193093-57194588 GRCh37]
ENST00000533235 [Chr.11(-): 57191493-57194958 GRCh37]
ENST00000533245 [Chr.11(-): 57191487-57194594 GRCh37]
ENST00000533524 [Chr.11(-): 57175243-57194594 GRCh37]
Annotation History:View Events (123)

GTEx Expression by Gene and Transcript

The heat map summarizes relative expression by tissue type at two levels of tissue detail, e.g., 'Brain' and 'Brain - Amygdala'. Choose among four calculated expression values, including mean and median RPKM values, and quantile normalized (QN) distributions of these values. (Note that differences between some distributions are subtle.) The coloring is relative to the mean of all displayed values. All values are log base 2. (See also PMT GTEx Expression Plotting.) Click on a transcript or tissue to resort the data.

Tissues:
Expression values:
No expression data exists for SLC43A3.

Variant Data

View all PMT variants for SLC43A3 on UCSC Genome Browser
Showing SNP features for transcript:   
1000 Genomes  

20141104 phase 3 variant call set of the 20130502 sequence freeze and alignments for SNPs and short indels (indels > 255 and structural variants are not included here). This variant set contains 2504 individuals from 26 populations (mouse over population column heading for population sizes).
Showing gene variants in regions defined by NCBI RefSeq exons, putative promoter, and PMT resequencing assays.
Note: Frequencies are calculated directly from reported genotypes and may vary from consensus frequencies reported by the 1000 Genomes project, which relied on additional data and the GATK tool Variant Quality Score Recalibrator.
dbSNP build 142.
Array availability: I - found on Illumina Human1M-Duo BeadChip (2011-04-21)  A - found on Affymetrix Genome-Wide SNP Array 6.0 (2011-06-21)  
Download the SNP table data as a tab-delimited file.

Transmembrane prediction: TOPO2 image is not available.