UCSF Pharmacogenetics of Membrane Transporters
Gene View
Common Name:UCP1
HGNC Symbol:UCP1
HGNC Description:uncoupling protein 1 (mitochondrial, proton carrier)
HGNC ID:12517
Superfamily:SLC
Chromosome:Chr.4(-): 141481014-141489989 GRCh37
Location:4q28-q31
OMIM:113730
OMIM Phenotype:UCP1 polymorphism
Accessions:U28480,X51952
Nucleotide RefSeq:NM_021833
Protein RefSeq:NP_068605
Entrez:7350
Ensembl:ENSG00000109424
Isoforms:2
Evidence:None
Tissues:None
Type:protein-coding
Sets:0
PharmGKB ID:
HPRD ID:00221
Substrates:None
Trivial Names:UCP, SLC25A7
Transcripts:NM_021833.4 [Chr.4(-): 141481050-141489959 GRCh37]
XM_005263206.1 [Chr.4(-): 141481014-141489989 GRCh37]
ENST00000262999 [Chr.4(-): 141480588-141489959 GRCh37]
Annotation History:View Events (11)

GTEx Expression by Gene and Transcript

The heat map summarizes relative expression by tissue type at two levels of tissue detail, e.g., 'Brain' and 'Brain - Amygdala'. Choose among four calculated expression values, including mean and median RPKM values, and quantile normalized (QN) distributions of these values. (Note that differences between some distributions are subtle.) The coloring is relative to the mean of all displayed values. All values are log base 2. (See also PMT GTEx Expression Plotting.) Click on a transcript or tissue to resort the data.

Tissues:
Expression values:
No expression data exists for UCP1.

Variant Data

View all PMT variants for UCP1 on UCSC Genome Browser
Showing SNP features for transcript:   
1000 Genomes  

20141104 phase 3 variant call set of the 20130502 sequence freeze and alignments for SNPs and short indels (indels > 255 and structural variants are not included here). This variant set contains 2504 individuals from 26 populations (mouse over population column heading for population sizes).
Showing gene variants in regions defined by NCBI RefSeq exons, putative promoter, and PMT resequencing assays.
Note: Frequencies are calculated directly from reported genotypes and may vary from consensus frequencies reported by the 1000 Genomes project, which relied on additional data and the GATK tool Variant Quality Score Recalibrator.
dbSNP build 142.
Array availability: I - found on Illumina Human1M-Duo BeadChip (2011-04-21)  A - found on Affymetrix Genome-Wide SNP Array 6.0 (2011-06-21)  
Download the SNP table data as a tab-delimited file.

Transmembrane prediction: TOPO2 image is not available.